Ms. Oyahida Khatun
Ph.D. Scholar
Dr. Shashank Tripathi’s Lab,
Department of Microbiology and Cell Biology,
Indian Institute of Science, Bangalore
Karnataka, India, 560012
Ms. Oyahida Khatun has been selected for The Sun Pharma Science Foundation Science Scholar Fellowship 2024 for young scientists in the field of Pharmaceutical Sciences. Her award-winning work was titled “Dissecting Molecular Interactions Between SARS-CoV-2 and Human Cellular Factors: Antiviral Targets and Viral Immune Evasion.” Her research focused on host-directed therapeutics development against SARS-CoV-2 and identifying the viral proteins that antagonize the cellular antiviral response. She aimed to identify the host factors constantly upregulated at the upper respiratory tract (URT), the primary site of infection, understand their role in virus pathogenesis and disease progression and explore their potential as host-directed therapeutics. In this endeavors, she has performed meta-analysis using the transcriptome and proteome datasets, where samples were collected from the nasopharyngeal swab and bronchoalveolar lavage fluid (BALF) of COVID-19 infected patients and healthy individuals as control. In doing so, she successfully identified thioredoxin as the most consistently upregulated host factor at the URT. Building on this, she has tested the antiviral activity of Auranofin, an FDA-approved inhibitor of thioredoxin reductase, a key enzyme regulating the activity of thioredoxin. In vitro and in vivo testing demonstrated the efficacy of Auranofin in mitigating SARS-CoV-2 replication in cell culture and pre-clinical hamsters. Furthermore, she has explored the antiviral efficacy of Auranofin in combination with other COVID-19 direct-acting antivirals (DAAs) in vitro to minimize the adverse effects of DAAs while enhancing protective antiviral activity against SARS-CoV-2. In parallel, she has identified ORF6, a small protein of SARS-CoV-2, antagonizes the innate immune pathway, the first line of the host defense mechanism against pathogen infection. She has demonstrated that ORF6 suppresses interferon (IFN) production by targeting critical immune proteins for degradation. Oyahida has finished her PhD recently under the supervision of Dr. Shashank Tripathi at the Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore. Her research interests are twofold: first, to develop host-directed therapeutics against SARS-CoV-2 infection; second, to identify SARS-CoV-2 proteins that antagonize the host innate immune machinery and characterize the viral evasion and antagonism strategies.